CmdID

CmdID / Commands

snakefmt

Format Snakemake files. tldr-pages

On several platforms

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Several platforms

from tldr-pages, CC BY 4.0

Format a specific Snakefile

snakefmt path/to/snakefileIdentify

Format all Snakefiles recursively in a specific directory

snakefmt path/to/directoryIdentify

Format a file using a specific configuration file

snakefmt --config path/to/config.toml path/to/snakefileIdentify

Format a file using a specific maximum line length

snakefmt --line-length 100 path/to/snakefileIdentify

Simulate formatting and display the changes that would be made

snakefmt --diff path/to/snakefileIdentify